We invite the submission of original research contributions in (but not limited to) the areas listed below. Quality papers accepted will be invited to publish in IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB).
- Protein foundational models
- AI-driven therapeutics development
- Large language models for bioinformatics and computational biology
- Generative AI for bioinformatics and computational biology
- Semantic web, biomedical ontologies and ontology-driven data integration methods
- Biological network visualization
- Information visualization and visual analytics for biomedical data
- Development of deep learning methods for biological and clinical data
- Novel methods and frameworks for mining and integrating big biological data
- Discovering biological networks and pathways underlying biological processes and diseases
- Analysis, discovery of biomarkers and mutations, and disease risk assessment
- Comparative genomics
- Metagenome analysis using sequencing data
- RNA-seq and microarray-based gene expression analysis
- Genome-wide analysis of non-coding RNAs
- Genome-wide regulatory motif discovery
- Structural bioinformatics
- Automated annotation of genes and proteins
- Discovery of structural variations from next-generation sequencing (NGS) data
- Correlating NGS with proteomics data analysis
- Discovery of genotype-phenotype associations
- Building predictive models for complex phenotypes
- Functional annotation of genes and proteins
- Cheminformatics
- Special biological data management techniques
- Privacy and security issues in mining genomic databases
- Predictive modeling for personalized treatment
- Text mining for biomedical literature and clinical notes
- Information retrieval for healthcare and biomedical applications
- Biomedical signal analysis and processing
- Intelligent medical data management
- Collaboration technologies for biomedicine
- Social networks for biomedicine
- Bioimage analysis, single-cell analysis
Submission Guidelines
Papers should be at most 10 pages in length, single-spaced, in font size 10 or larger with one-inch margins on all sides. Using the ACM Proceedings Format is highly recommended. A paper should be submitted in PDF format through Microsoft CMT at the following link: https://cmt3.research.microsoft.com/BIOKDD2025. The submissions will be judged for quality and relevance through single-blind reviewing.
Acknowledgment
The Microsoft CMT service was used for managing the peer-reviewing process for this conference. This service was provided for free by Microsoft and they bore all expenses, including costs for Azure cloud services as well as for software development and support.